BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016F03LP1|AL427037
(993 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1341 1885 0.0
>3x_Contig1341
Length = 7901
Score = 1885 bits (946), Expect = 0.0
Identities = 972/985 (98%), Gaps = 1/985 (0%)
Strand = Plus / Plus
Query: 4 agcatcagggtcaacagcaatcgttgccctactcataaacggatcaatgctctatgtggc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604 agcatcagggtcaacagcaatcgttgccctactcataaacggatcaatgctctatgtggc 2663
Query: 64 gaatactggtgattctcgttgcatactttctaaaaagaataaagctataaagccaatgtc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2664 gaatactggtgattctcgttgcatactttctaaaaagaataaagctataaagccaatgtc 2723
Query: 124 atatgatcacaaaccacagcatataggagaactgataagcaataaacgatgacgggggaa 183
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2724 atatgatcacaaaccacagcatataggagaactgataag-aataaacgatgacgggggaa 2782
Query: 184 cggtttcacttggaagagtgggaggcgtgcttgcactcagtcgagctttcggagatttcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2783 cggtttcacttggaagagtgggaggcgtgcttgcactcagtcgagctttcggagatttcc 2842
Query: 244 agttcaaaaggaatgtgaaatatcagaacctcaatacccttgccgtcagcagcaagagga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2843 agttcaaaaggaatgtgaaatatcagaacctcaatacccttgccgtcagcagcaagagga 2902
Query: 304 aatacatcccggcagaggaggctcaggttacagtagaaccggatgtgcttccgcacgcca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2903 aatacatcccggcagaggaggctcaggttacagtagaaccggatgtgcttccgcacgcca 2962
Query: 364 tcgatctgtcacaagatgaatttyyagtcttagcatgcgatggaatatgggatgtatact 423
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2963 tcgatctgtcacaagatgaatttttagtcttagcatgcgatggaatatgggatgtatact 3022
Query: 424 cgaacaaagcattggtgaatttcatcaaatatcatttgacactcggtctaaagttggata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3023 cgaacaaagcattggtgaatttcatcaaatatcatttgacactcggtctaaagttggata 3082
Query: 484 atatcctcgcaaagatattagaccatggaataagctgcgcagattcgaatacaggggtcg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3083 atatcctcgcaaagatattagaccatggaataagctgcgcagattcgaatacaggggtcg 3142
Query: 544 gatttgataacttcacattgatcgtggttgttttacagcaaccaggagagactttagatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3143 gatttgataacttcacattgatcgtggttgttttacagcaaccaggagagactttagatg 3202
Query: 604 agtggtatgcmagactcacatccagactggmaagagaaamaggtctgtyatagacgcttt 663
|||||||||| ||| ||| ||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 3203 agtggtatgcaagaatcaaatccagactggaaagagaaaaaggtctgttatagacgcttt 3262
Query: 664 tcacgtgcatttatttcagtgtccatttctgctattatgtatatbgttcctatttatttc 723
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3263 tgacgtgcatttatttcagtgtccatttctgctattatgtatattgttcctatttatttc 3322
Query: 724 tcattccccccctcaaaatctcctagataataatagcatcgtattgaatatcacatatac 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3323 tcattccccccctcaaaatctcctagataataatagcatcgtattgaatatcacatatac 3382
Query: 784 agtatttctacgctgcaaagtgaccaaccgatgtagtgatcatgcaaggtgctgcattca 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3383 agtatttctacgctgcaaagtgaccaaccgatgtagtgatcatgcaaggtgctgcattca 3442
Query: 844 atgaacaaaaagtcacgtgactttgttcaacatcggtctcagatttcamatactctgtaa 903
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3443 atgaacaaaaagtcacgtgactttgttcaacatcggtctcagatttcaaatactctgtaa 3502
Query: 904 acataaacaccagtctgttcatgcagaaatattagantcatcaatttttggtgttatcga 963
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3503 acataaacaccagtctgttcatgcagaaatattagaatcatcaatttttggtgttatcga 3562
Query: 964 cagctacattctagtgagcaagggc 988
|||||||||||||||||||||||||
Sbjct: 3563 cagctacattctagtgagcaagggc 3587
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6003
Number of Sequences: 1807
Number of extensions: 6003
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 993
length of database: 10,358,551
effective HSP length: 16
effective length of query: 977
effective length of database: 10,329,639
effective search space: 10092057303
effective search space used: 10092057303
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)